Team:HTHS Trussville AL/Team Log

From 2014hs.igem.org

(Difference between revisions)
(August , 2013)
(September 23, 2013)
 
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== August , 2013 ==
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== August 26, 2013==
August 26, 2013:
August 26, 2013:
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Determine if the Pho Sensor is the one the group wants to use
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Find the yeast plasmid vector to put the sequence into
+
1)Determine if the Pho Sensor is the one the group wants to use
-
Determine the restriction enzyme needed to cut the plasmid (and put the sequence in)
+
 
-
Get RFP (Red Fluorescent Protein) DNA sequence
+
2)Find the yeast plasmid vector to put the sequence into
-
Find and determine if the inverter DNA sequence will work
+
 
-
Gibson Assembly
+
3)Determine the restriction enzyme needed to cut the plasmid (and put the sequence in)
-
Put plasmid through PCR
+
 
-
Test with electrophoresis  
+
4)Get RFP (Red Fluorescent Protein) DNA sequence
-
Cut sequences out of gels if working  
+
 
-
Inject plasmid into yeast
+
5)Find and determine if the inverter DNA sequence will work
-
Grow Yeast  
+
 
-
Test Yeast  
+
6)Gibson Assembly
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Develop standardization test for red color
+
 
-
Water quality test
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7)Put plasmid through PCR
 +
 
 +
8)Test with electrophoresis  
 +
 
 +
9)Cut sequences out of gels if working  
 +
 
 +
10)Inject plasmid into yeast
 +
 
 +
11)Grow Yeast  
 +
 
 +
12)Test Yeast  
 +
 
 +
13)Develop standardization test for red color
 +
 
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14)Water quality test
== September 17, 2013 ==
== September 17, 2013 ==
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7.)Discuss restriction enzymes
7.)Discuss restriction enzymes
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*See Figure 1: First Plasmid Model
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== September 23, 2013 ==
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== April 16, 2014 ==
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First skype meeting with Dr. Zahorchak
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Ran a flash gel on the Pho5 plasmid with shaken and incubated samples.
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Remove inverter from the plasmid

Latest revision as of 03:01, 21 June 2014

August 26, 2013

August 26, 2013:

1)Determine if the Pho Sensor is the one the group wants to use

2)Find the yeast plasmid vector to put the sequence into

3)Determine the restriction enzyme needed to cut the plasmid (and put the sequence in)

4)Get RFP (Red Fluorescent Protein) DNA sequence

5)Find and determine if the inverter DNA sequence will work

6)Gibson Assembly

7)Put plasmid through PCR

8)Test with electrophoresis

9)Cut sequences out of gels if working

10)Inject plasmid into yeast

11)Grow Yeast

12)Test Yeast

13)Develop standardization test for red color

14)Water quality test

September 17, 2013

To Dos:

1.)Download new software (Tinkercell and GENtle)

2.)Re-do Gantt chart

3.)Redraw plasmid

4.)Start a list of potential questions and problems

5.)Finish scholarly article reviews

6.)Put DNA sequences into software

-Find Pho 5 sequence and promoter

-Find RFP sequence

-Find plasmid

--Verify origin of replication --Verify antibiotic resistance --Antibiotic vs. antifungal

7.)Discuss restriction enzymes

  • See Figure 1: First Plasmid Model

September 23, 2013

First skype meeting with Dr. Zahorchak

Remove inverter from the plasmid