Team:Shasta Summit CA

From 2014hs.igem.org

(Difference between revisions)
Line 3: Line 3:
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<!-- TemplateBeginEditable name="doctitle" -->
<!-- TemplateBeginEditable name="doctitle" -->
-
<title>Untitled Document</title>
+
<title>Goal</title>
<!-- TemplateEndEditable -->
<!-- TemplateEndEditable -->
-
<!-- TemplateBeginEditable name="head" -->
+
<!-- TemplateBeginEditable name="head" -->
<!-- TemplateEndEditable -->
<!-- TemplateEndEditable -->
<style type="text/css">
<style type="text/css">
Line 30: Line 30:
border: none;
border: none;
}
}
 +
/* ~~ Styling for your site's links must remain in this order - including the group of selectors that create the hover effect. ~~ */
/* ~~ Styling for your site's links must remain in this order - including the group of selectors that create the hover effect. ~~ */
a:link {
a:link {
Line 43: Line 44:
}
}
-
/* ~~ this fixed width container surrounds the other divs ~~ */
+
/* ~~this fixed width container surrounds the other divs~~ */
.container {
.container {
width: 960px;
width: 960px;
Line 55: Line 56:
}
}
-
/* ~~ This is the layout information. ~~  
+
/* ~~ These are the columns for the layout. ~~  
-
1) Padding is only placed on the top and/or bottom of the div. The elements within this div have padding on their sides. This saves you from any "box model math". Keep in mind, if you add any side padding or border to the div itself, it will be added to the width you define to create the *total* width. You may also choose to remove the padding on the element in the div and place a second div within it with no width and the padding necessary for your design.
+
1) Padding is only placed on the top and/or bottom of the divs. The elements within these divs have padding on their sides. This saves you from any "box model math". Keep in mind, if you add any side padding or border to the div itself, it will be added to the width you define to create the *total* width. You may also choose to remove the padding on the element in the div and place a second div within it with no width and the padding necessary for your design. You may also choose to remove the padding on the element in the div and place a second div within it with no width and the padding necessary for your design.
-
*/
+
2) No margin has been given to the columns since they are all floated. If you must add margin, avoid placing it on the side you're floating toward (for example: a right margin on a div set to float right). Many times, padding can be used instead. For divs where this rule must be broken, you should add a "display:inline" declaration to the div's rule to tame a bug where some versions of Internet Explorer double the margin.
 +
3) Since classes can be used multiple times in a document (and an element can also have multiple classes applied), the columns have been assigned class names instead of IDs. For example, two sidebar divs could be stacked if necessary. These can very easily be changed to IDs if that's your preference, as long as you'll only be using them once per document.
 +
 +
4) If you prefer your nav on the right instead of the left, simply float these columns the opposite direction (all right instead of all left) and they'll render in reverse order. There's no need to move the divs around in the HTML source.
 +
 +
*/
 +
.sidebar1 {
 +
float: left;
 +
width: 180px;
 +
background-color: #EADCAE;
 +
padding-bottom: 10px;
 +
}
.content {
.content {
padding: 10px 0;
padding: 10px 0;
 +
width: 780px;
 +
float: left;
 +
}
 +
 +
/* ~~ This grouped selector gives the lists in the .content area space ~~ */
 +
.content ul, .content ol {
 +
padding: 0 15px 15px 40px; /* this padding mirrors the right padding in the headings and paragraph rule above. Padding was placed on the bottom for space between other elements on the lists and on the left to create the indention. These may be adjusted as you wish. */
 +
}
 +
 +
/* ~~ The navigation list styles (can be removed if you choose to use a premade flyout menu like Spry) ~~ */
 +
ul.nav {
 +
list-style: none; /* this removes the list marker */
 +
border-top: 1px solid #666; /* this creates the top border for the links - all others are placed using a bottom border on the LI */
 +
margin-bottom: 15px; /* this creates the space between the navigation on the content below */
 +
}
 +
ul.nav li {
 +
border-bottom: 1px solid #666; /* this creates the button separation */
 +
}
 +
ul.nav a, ul.nav a:visited { /* grouping these selectors makes sure that your links retain their button look even after being visited */
 +
padding: 5px 5px 5px 15px;
 +
display: block; /* this gives the link block properties causing it to fill the whole LI containing it. This causes the entire area to react to a mouse click. */
 +
width: 160px;  /*this width makes the entire button clickable for IE6. If you don't need to support IE6, it can be removed. Calculate the proper width by subtracting the padding on this link from the width of your sidebar container. */
 +
text-decoration: none;
 +
background-color: #C6D580;
 +
}
 +
ul.nav a:hover, ul.nav a:active, ul.nav a:focus { /* this changes the background and text color for both mouse and keyboard navigators */
 +
background-color: #ADB96E;
 +
color: #FFF;
}
}
Line 70: Line 110:
padding: 10px 0;
padding: 10px 0;
background-color: #CCC49F;
background-color: #CCC49F;
 +
position: relative;/* this gives IE6 hasLayout to properly clear */
 +
clear: both; /* this clear property forces the .container to understand where the columns end and contain them */
}
}
Line 93: Line 135:
<div class="container">
<div class="container">
-
<div align="center">
+
  <div class="header"><a href=""><img src="http://static.wixstatic.com/media/1cd834_1a27c2ebc5f34cd3ab87bed5ed4eda83.jpg_srz_p_116_114_75_22_0.50_1.20_0.00_jpg_srz" alt="Insert Logo Here" name="Insert_logo" width="139" height="122" id="Insert_logo" style="background-color: #C6D580; display:block;" /></a>  
-
</div>
+
     <!-- end .header --></div>
-
  <div class="header" align="center" ><a href="#"></a>  
+
  <div class="sidebar1">
-
     <!-- end .header -->
+
     <ul class="nav">
-
     <h1>iGEM Team </h1>
+
      <li><a href="https://2014hs.igem.org/Team:Shasta_Summit_CA">Home</a></li>
-
    <h3> of </h3>
+
      <li><a href="https://2014hs.igem.org/Team:Shasta_Summit_CA/Goal">Goal</a></li>
-
    <h2> Summit Shasta High School </h2>
+
      <li><a href="https://2014hs.igem.org/Team:Shasta_Summit_CA/Project">Project</a></li>
-
    <img src="https://static.igem.org/mediawiki/2014hs/e/e5/Shasta_Summit_CA_logo.png" />
+
      <li><a href="https://2014hs.igem.org/Team:Shasta_Summit_CA/Team">The Team</a></li>
-
  </div>
+
      <li><a href="https://2014hs.igem.org/Team:Shasta_Summit_CA/Outreach">Outreach</a></li>
 +
        <li><a href="https://2014hs.igem.org/Team:Shasta_Summit_CA/Sponsors">Sponsors</a></li>
 +
    </ul>
 +
  <h2> Safety </h2>
 +
<p> In the lab at Skyline College we are always supervised by Chris Vulpe (Professor at UC Berkeley), and Nicholas Kapp (Professor at Skyline College). </p>
 +
    <!-- end .sidebar1 --></div>
   <div class="content">
   <div class="content">
     <h1 align="center">Introduction</h1>
     <h1 align="center">Introduction</h1>
 +
    <img src="https://static.igem.org/mediawiki/2014hs/e/e5/Shasta_Summit_CA_logo.png" width="783" height="298"  />
     <p>Located in the Bay Area, Summit Shasta is a revolutionary school that prefers to encourage students to grow from their mistakes, rather than have students memorize meaningless facts. They push their students to seek out challenges and overcome them, thus the iGem team was born, with help they hope to achieve success in bringing their ideas to life. The team is part of Summit Shasta's first year being around, comprised entirely of eager freshman. Perhaps one day they will revolutionize the world.</p>
     <p>Located in the Bay Area, Summit Shasta is a revolutionary school that prefers to encourage students to grow from their mistakes, rather than have students memorize meaningless facts. They push their students to seek out challenges and overcome them, thus the iGem team was born, with help they hope to achieve success in bringing their ideas to life. The team is part of Summit Shasta's first year being around, comprised entirely of eager freshman. Perhaps one day they will revolutionize the world.</p>
-
    <h3 align="center">Goal</h3>
+
   <!-- end .content --></div>
-
    <p>Our goal is to create a CO (Carbon Monoxide) sensor that will detect CO and create a noticeable color. This CO sensor would be more useful than it&rsquo;s electronic cousin in many ways:
+
-
   
+
-
      <p>1. It would not require constant power, this means that you could use it in locations with easy access to power, such as third world countries, underground places/mines, portable/handheld, etc.</p>
+
-
      <p>2. It would be small and compact, allowing for easy transportation, meaning it could be carried by people everywhere, providing constant protection. It would create a smell, this means that deaf and blind people would be able to be aware of it, as well as allowing people with headphones or ear protection to sniff out CO.</p>
+
-
      <p>3. This means that it would have many uses beyond the ordinary electric, roof-bound, carbon monoxide sensor.</p>
+
-
  </ol>
+
-
    </p>
+
-
 
+
-
<br />
+
-
    <div>
+
-
    <br />
+
-
    <h3 align="center">Our Project</h3>
+
-
    <p>We plan to ultimately create a bacteria that would be stimulated by the presence of CO to produce a red hue. The uses of this kind of organism/bacteria would include disaster relief in areas that do not have the access to the equipment needed to monitor the concentration of CO in the area. The goal would be to have the bacteria glow red in the presence of CO, and different colors based on the concentration. For example: It would glow a darker red and/or emit a smell if the level of CO in the air was at fatal levels. It is based upon the percentage of CO in the air. Carbon Monoxide is a fatal gas that is undetectable to humans. In iGEM we plan to use biobricks to make sensors. We plan to construct two sensors, one with the sensor and one with the reporter. The plasmid with the reporter with glow red if the levels of CO are at fatal levels. iGEM also requires outreach which the team has and is doing, the outreach includes teaching, and using a website to convey information.
+
-
</p>
+
-
<h2 align="center">The Plan</h2>
+
-
<h3>The Notebook</h3>
+
-
<p>Every Tuesday we meet to make progress on our iGEM project. On Thursdays we go to the lab at skyline collage and do laboratory work, at the end of our meetings we discuss the progress we have made, and research new information for our next meeting! </p>
+
-
<h3> Making the Bacteria </h3>
+
-
    <p> Doing some research the team was able to find an organism that was able to sense Carbon Monoxide and react. Using that gene they added that to the 1-9i plate, which contains an RBS and an RFP. This is going to be the reporter plasmid. Then they made a plasmid that would be the sensor. (The CooA gene.) Using the 3a assembly the team would combine the two plasmids onto the pSB1C3 plasmid backbone.
+
-
</p>
+
-
+
-
<h3> Testing The Bacteria </h3>
+
-
    <p>The team plans to expose the bacteria to Carbon Monoxide. They will start with a preliminary test of simply exposing the bacteria to carbon monoxide. The second set of tests they plan to do would be to create a gas mixture of 5% carbon monoxide, 1% carbon monoxide, and .1% carbon monoxide, respectively. Making sure that the mixture is correct is difficult, as measuring how much gas is release is difficult. So they filled a 2 liter graduated cylinder with water then pumped Carbon Monoxide into the container and stopped when there was approximately 100ml of water out of the graduated cylinder. With 100ml out that means there is 100ml of gas in the graduated cylinder. Then they will remove the gas and add that to a cylinder filled with 1900ml of air. Then with that mixture they will pump that out into a container containing the bacteria. 100ml in a 2000ml total would make that 5% mixture.
+
-
</p>
+
-
 
+
-
<h3> 3A Assembly </h3>
+
-
<p>The team had a blast using the 3A assembly kit, learning all sorts of things about cutting plasmids and instituting their own. Although with some failures, the team moved on and created a successfully modified plasmid. </p>
+
-
<h1 align="center">Outreach</h1>
+
-
<h2>Expanding Your Horizon</h2>
+
-
<p>
+
-
On March 15th the team went to Skyline College to be part of the Expanding Your Horizons program. They introduced future high schoolers to the idea of synthetic biology. They hoped to inspire young women to be more interested in the field of science.
+
-
<img src="https://static.igem.org/mediawiki/2014hs/1/12/EYH.jpg" border=2 align="center">
+
-
</p>
+
-
 
+
-
<h3> Poster Presentation at Skyline College </h3>
+
-
 
+
-
<p>On April 24th, 2014, the team gave a presentation about their ideas and synthetic biology at Skyline College in the form of a poster presentation. </p>
+
-
<p><img src="https://static.igem.org/mediawiki/2014hs/thumb/b/ba/POSTER.JPG/800px-POSTER.JPG" border=2></p>
+
-
 
+
-
<h2 align="center"> Results/Conclusions </h2>
+
-
<p>Over the course of the year we have practiced with bacteria by making transformations and competent cells. Here is a diagram of the project we intend to complete:
+
-
<img src="https://static.igem.org/mediawiki/2014hs/e/e7/PlasmidDiagram.jpg" width="950" height="563"/>
+
-
</p>
+
-
 
+
-
<h2>Human Practices </h2>
+
-
<p>As stated before, this CO sensor would be useful in many ways:
+
-
<p>1. It would not require constant power, this means that you could use it in locations with easy access to power, such as third world countries, underground places/mines, portable/handheld, etc.</p>
+
-
<p>2.It would be small and compact, allowing for easy transportation, meaning it could be carried by people everywhere, providing constant protection.</p>
+
-
<p>3. It would create a smell, this means that deaf and blind people would be able to be aware of it, as well as allowing people with headphones or ear protection to sniff out CO. This Means that it would have many uses beyond the ordinary electric, roof-bound, carbon monoxide sensor. </p>
+
-
<h2>The Team </h2>
+
-
<dl>
+
-
   <dt> Professors:</dt>
+
-
  <dd>Chris Vulpe of UC Berkeley</dd>
+
-
  <dd> Nick Kapp of Skyline College  </dd>
+
-
  <dt>Students:  </dt>
+
-
  <dd>Albert Liu  </dd>
+
-
  <dd>Alex Liu  </dd>
+
-
  <dd>Aslan Nguyen  </dd>
+
-
  <dd>Brendan Thompson  </dd>
+
-
  <dd>Dexter Hamilton  </dd>
+
-
  <dd>Ethan Bull-Vulpe  </dd>
+
-
  <dd>Jen Co  </dd>
+
-
  <dd>Jimmy Lujan  </dd>
+
-
  <dd>Kyra Newcomb  </dd>
+
-
  <dd>Mitchell Wong  </dd>
+
-
  <dd>Osama Hanhan  </dd>
+
-
  <dd>Sydney Huddleston  </dd>
+
-
  <dd>Billiam McEachen </dd>
+
-
</dl>
+
-
<h2>Sponsors</h2>
+
-
<p>Skyline College for Lab Space </p>
+
-
<P> <img src="https://static.igem.org/mediawiki/2014hs/9/9d/Skylinelogo.jpg"></P>
+
-
<p> IDT </p>
+
-
 
+
-
<p>
+
-
<img src="https://static.igem.org/mediawiki/2014hs/4/4d/Integrated_DNA_Technologies.jpg">
+
-
</p>
+
-
 
+
-
<p> Bio-Rad </p>
+
-
<p> <img src="https://static.igem.org/mediawiki/2014hs/e/ea/LogoBIORAD.jpg">
+
-
 
+
-
<h2> Safety </h2>
+
-
<p> In the lab at Skyline College we are always supervised by Chris Vulpe (Professor at UC Berkeley), and Nicholas Kapp (Professor at Skyline College). </p>
+
-
    <!-- end .content --></div>
+
   <div class="footer">
   <div class="footer">
     <p>Contact: shastahsigem@gmail.com</p>
     <p>Contact: shastahsigem@gmail.com</p>

Revision as of 19:18, 12 June 2014

Goal

Safety

In the lab at Skyline College we are always supervised by Chris Vulpe (Professor at UC Berkeley), and Nicholas Kapp (Professor at Skyline College).

Introduction

Located in the Bay Area, Summit Shasta is a revolutionary school that prefers to encourage students to grow from their mistakes, rather than have students memorize meaningless facts. They push their students to seek out challenges and overcome them, thus the iGem team was born, with help they hope to achieve success in bringing their ideas to life. The team is part of Summit Shasta's first year being around, comprised entirely of eager freshman. Perhaps one day they will revolutionize the world.

Contact: shastahsigem@gmail.com

Retrieved from "http://2014hs.igem.org/Team:Shasta_Summit_CA"