Team:Shenzhen SZMS

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Revision as of 12:10, 6 March 2014

This is a template page. READ THESE INSTRUCTIONS.

You are provided with this team page template with which to start the iGEM season. You may choose to personalize it to fit your team but keep the same "look." Or you may choose to take your team wiki to a different level and design your own wiki. You can find some examples HERE.

You MUST have the following information on your wiki:

a team description
project description
safety information (did your team take a safety training course? were you supervised in the lab?)
team attribution (who did what part of your project?)

You may also wish to add other page such as:

lab notebook
sponsor information
other information

REMEMBER, keep all of your pages within your teams namespace.
Example: 2013hs.igem.org/Team:Shenzhen_SZMS/Our_Pets

You can write a background of your team here. Give us a background of your team, the members, etc. Or tell us more about something of your choosing.
Tell us more about your project. Give us background. Use this as the abstract of your project. Be descriptive but concise (1-2 paragraphs)	File:Shenzhen SZMS team.png Your team picture
	Team Shenzhen_SZMS

Official Team Profile

Our project is to create an E. coli plant-sitter toolkit whose functions include temperature moderation, fungi inhibition, and hormone provision. We aim to achieve smart manipulation of plant growth introduced through synthetic biology. We hope that our toolkit will simplify the process of plant cultivation and make the technology of synthetic biology accessible to people’s daily life.

Temperature moderation

It is observed that a considerable number of domestic plant-deaths are caused by negligence of temperature control in overly hot or cold environments. Therefore, we came up with a system which reduces these death-rates and aids the healthy growth of plants by keeping the temperature within a suitable range. Our mechanism of temperature moderation, including a warming system and a cooling system, aims to keep the temperature between 15℃ and 30℃ (the fittest temperature range for most plants) by using RNA thermometers and two controllable chemical reactions, one exothermic and the other endothermic. During the cooling process, the RNA thermometer is activated when the surrounding temperature reaches 30℃, which encodes phytoene dehydrogenase (PDS). The encoded enzyme then dehydrates phytoene to form phytofluene, initiating an endothermic reaction which absorbs energy and cools down the environment. When the temperature drops to around 20℃, a second RNA thermometer is then activated, followed by an inhibitor which ends the translation of PDS and thus the absorption of heat. During the warming process, the RNA thermometer is activated when the surrounding temperature reaches 15℃, which encodes elastase. The encoded enzyme then hydrolyzes protein, initiating an exothermic reaction which releases energy and warms up the environment. When the temperature rises up to around 20℃, a second RNA thermometer is activated, followed by an inhibitor which ends the translation of elastase and thus the release of heat. Through this system of temperature control, we are able to provide an agreeable temperature range which ensures the plants of their healthy development.

Fungi Inhibitor

Since our plants and e.coli are exposed to non-sterile condition as in everyday life, they are subjects to contamination by fungi in the air. In order to guarantee the healthy growth of both plants and e.coli, we designed a system which autonomously defends them against fungi contamination by attacking fungi’s cell walls, which primarily consist of chitin. Our aim is to degrade the chitin in the fungi by synthesizing chitinase. With the chitinase coding sequence being inserted in the plasmid, the e.coli will regularly produce chitinase, which attacks the fungi’s cell walls, hinders the normal chitin synthesis, disturbs the life activities of fungi, eliminates fungi contamination, and thus ensures a safe environment for both our plants and our e.coli

Hormone provision

In order to fulfill our plan of smart cultivation, certain vital plant-growth hormones should be provided to further ensure the optimum development of plants. Auxin, GA, CTK and ethyne are all important hormones in plant-growth, among which we chose auxin for its comprehensive promotion in shoots elongation, root initiation and cell division. Without external sources from which hormones can be derived, it is difficult for a single plant by itself to synthesize sufficient hormones to guarantee its optimal development. Therefore, we employ e.coli as the source of auxin by inserting auxin’s coding sequence into the plasmid. In this way, we are able to construct a convenient auxin supply which serves as a supportive aid to the plants’ development.

Notebook

Show us how you spent your days.

Results/Conclusions

What did you achieve over the course of your semester?

Safety

What safety precautions did your team take? Did you take a safety training course? Were you supervised at all times in the lab?

Attributions

Who worked on what?

Human Practices

What impact does/will your project have on the public?

Fun!

What was your favorite team snack?? Have a picture of your team mascot?

<forum_subtle />

@@ Line 55: / Line 55: @@
 ===Project===
-What are you working on this semester?
+Our project is to create an '''E. coli plant-sitter''' toolkit whose functions include temperature moderation, fungi inhibition, and hormone provision. We aim to achieve smart manipulation of plant growth introduced through synthetic biology. We hope that our toolkit will simplify the process of plant cultivation and make the technology of synthetic biology accessible to people’s daily life.
+====Temperature moderation====
+It is observed that a considerable number of domestic plant-deaths are caused by negligence of temperature control in overly hot or cold environments. Therefore, we came up with a system which reduces these death-rates and aids the healthy growth of plants by keeping the temperature within a suitable range.
+Our mechanism of temperature moderation, including a warming system and a cooling system, aims to keep the temperature between 15℃ and 30℃ (the fittest temperature range for most plants) by using RNA thermometers and two controllable chemical reactions, one exothermic and the other endothermic. During the cooling process, the RNA thermometer is activated when the surrounding temperature reaches 30℃, which encodes phytoene dehydrogenase (PDS). The encoded enzyme then dehydrates phytoene to form phytofluene, initiating an endothermic reaction which absorbs energy and cools down the environment. When the temperature drops to around 20℃, a second RNA thermometer is then activated, followed by an inhibitor which ends the translation of PDS and thus the absorption of heat. During the warming process, the RNA thermometer is activated when the surrounding temperature reaches 15℃, which encodes elastase. The encoded enzyme then hydrolyzes protein, initiating an exothermic reaction which releases energy and warms up the environment. When the temperature rises up to around 20℃, a second RNA thermometer is activated, followed by an inhibitor which ends the translation of elastase and thus the release of heat.
+Through this system of temperature control, we are able to provide an agreeable temperature range which ensures the plants of their healthy development.
+====Fungi Inhibitor====
+Since our plants and e.coli are exposed to non-sterile condition as in everyday life, they are subjects to contamination by fungi in the air. In order to guarantee the healthy growth of both plants and e.coli, we designed a system which autonomously defends them against fungi contamination by attacking fungi’s cell walls, which primarily consist of chitin. Our aim is to degrade the chitin in the fungi by synthesizing chitinase. With the chitinase coding sequence being inserted in the plasmid, the e.coli will regularly produce chitinase, which attacks the fungi’s cell walls, hinders the normal chitin synthesis, disturbs the life activities of fungi, eliminates fungi contamination, and thus ensures a safe environment for both our plants and our e.coli
+====Hormone provision====
+In order to fulfill our plan of smart cultivation, certain vital plant-growth hormones should be provided to further ensure the optimum development of plants. Auxin, GA, CTK and ethyne are all important hormones in plant-growth, among which we chose auxin for its comprehensive promotion in shoots elongation, root initiation and cell division. Without external sources from which hormones can be derived, it is difficult for a single plant by itself to synthesize sufficient hormones to guarantee its optimal development. Therefore, we employ e.coli as the source of auxin by inserting auxin’s coding sequence into the plasmid. In this way, we are able to construct a convenient auxin supply which serves as a supportive aid to the plants’ development.
 ===Notebook===